Publication list


Absorption, Fluorescence, and Linear Dichroism Spectra of Fluorescein Mercuric Acetate (FMA) bound to F-actin

K. Mihashi, M. Nakabayashi, H. Yoshimura and H. Ohnuma, J.Biochem., 85, 359-366 (1979).


The Binding of Myosin Subfragment-1 to F-actin in the Absence of Nucleotide: Evidence for Dependence on F-actin  Concentration

 H. Yoshimura and K. Mihashi, J.Biochem., 92, 497-508 (1982).


Internal Motion of F-actin in 10-6 - 10-3 s Time Range Studied by Transient Absorption Anisotropy: Detection of Torsional Motion

K. Mihashi, H. Yoshimura, T. Nishio, A. Ikegami and K. Kinosita, Jr., J.Biochem., 93, 1705-1707 (1983).


The Binding of Myosin S-1 to F-actin: Evidence for the Dependence on F-actin Concentration

Hideyuki Yoshimura and Koshin Mihashi, In Actin:Structure and Function in Muscle and Non-muscle cells, Academic Press Australia, 293-300, (1983).


Transient Optical Anisotropy of F-actin and Regulated F-actin in the 10-3 to 10-9 sec Time Range

K. Mihashi, H. Yoshimura, T. Nishio, In Actin:Structure and Function in Muscle and Non-muscle cells, Academic Press Australia, 81-88, (1983).


Torsional Motion of Eosin-labeled F-actin as Detected in the Time-resolved Anisotropy Decay of the Probe in the Sub-millisecond Time Range

H. Yoshimura, T. Nishio, K. Mihashi, K. Kinosita, Jr. and A. Ikegami, J.Mol.Biol., 179, 453-467 (1984).


Submicrosecond and Microsecond Rotational Motions of Myosin Head in Solution and in Myosin Synthetic Filaments as Revealed by Time-Resolved Optical Anisotropy Decay Measurements

K. Kinosita, Jr., S. Ishiwata, H. Yoshimura, H. Asai and A. Ikegami, Biochemistry, 23, 5963-5975 (1984).


Information Processing for the Organization of Chemotactic Behavior of Physarum polycephalum Studied by Micro-Thermography

H. Tanaka, H. Yoshimura, Y. Miyake, J. Imaizumi, K. Nagayama and H. Shimizu, Protoplasma, 138, 98-104 (1987).


Rotational Motion of Myosin Heads in Myofibril Studied by Phosphorescence Anisotropy Decay Measurements

S. Ishiwata, K. Kinosita, Jr., H. Yoshimura and A. Ikegami, J.Biol.Chem., 262, 8314-8317 (1987).


Electroporation of Cell Membrane Visualized Under a Pulse-Laser Fluorescence Microscope

K. Kinosita, Jr., I. Ashikawa, N. Saita, H. Yoshimura, H. Itoh, K. Nagayama A. Ikegami, Biophys.J., 53, 1015-1019 (1988).


Dynamic structure of F-actin and its Ca-dependent regulation under the influence of tropomyosin-troponin system

K. Mihashi, N. Suzuki, H. Yoshimura and K. Kinoshita, Jr., Mol.Cell.Biol.(Life Sci. Adv.), 7, 143-148 (1988).


Hexagonal Structure of Two-Dimensional Crystals of the a3b3 Complex of Thermophilic ATP Synthase

H. Yoshimura, S. Endo, M. Matsumoto, K. Nagayama and Y. Kagawa, J.Biochem., 106, 958-960 (1989).


Optical Anisotropy Decay Studied of the Dynamic Structure of Myosin Filaments

S.Ishiwata, K.Kinosita, Jr., H.Yoshimura and A.Ikegami,  In Molecular Mechanism of Muscle Contraction, (Plenum Publishing Co.) p.267-276 (1988).


A Uniform Monolayer Spread from an Aqueous Solution on a Clean Mercury Surface

H.Yoshimura, M.Matsumoto and K.Nagayama, In Recent Progress of Life Science Technology in Japan, (Ikawa and Wada, eds.),  Academic Press,  p.69-77 (1989).


Temperature Observation of Biological Cells with Thermal Microscope

H.Yoshimura and K.Nagayama, In Mechanobiological Research on the Masticatory System, (K.Kuroda, ed.),  VEG Verlag, Tokyo, Berlin,  p.227-231 (1989).


Two-dimensional Crystallization of Proteins on Mercury

H. Yoshimura, M. Matsumoto, S. Endo and K. Nagayama, Ultramicroscopy, 32, 265-274 (1990).


Surfactant monolayers on a clean mercury surface: apparatus and experiments

M. Matsumoto, H. Yoshimura, V.S. Kulkarni and K. Nagayama, Colloid Polym.Sci., 268, 1174-1178 (1990).


Influence of Gas on the Properties of Monomolecular Films of Long-Chain Organic Compounds Spread at Gas-Mercury Interfaces

V.S. Kulkarni, H. Yoshimura, K. Nagayama and M. Matsumoto, J.Colloid and Interface Sci., 144, 586-590 (1991).


Image Analysis by Electron Microscopy of Two-dimensional Crystals Developed on a Mercury Surface of Chaperonin from Thermus themophilus

N. Ishii, H. Taguchi, M. Yoshida, H. Yoshimura and K. Nagayama, J.Biochem., 110, 905-908 (1991).


Monolayer Crystallization of Flagellar- L-P Rings by Sequential Addition and Depletion of Lipid

T. Akiba, H. Yoshimura and K. Namba, Science, 252, 1544-1546 (1991).


Two-dimensional Crystallization of Proteins on Mercury And its Characterization With Electron Crystallography

H.Yoshimura, S.Endo, K.Nagayama and M.Matsumoto, JEOLnews, 29E, 2-5 (1991).


Efficient Microtip Fabrication with Carbon Coating and Electron Beam Deposition for Atomic Force Microscopy

M. Yamaki, T. Miwa, H. Yoshimura and K. Nagayama, J.Vac.Sci. Technol. B, 10, 2447-2450 (1992).


Fibrous Textured Surface of an Ultrafiltration Membrane Delineated by Atomic Force Microscope

T. Miwa, M. Yamaki, H. Yoshimura, S. Ebina and K. Nagayama, Jpn.J.Appl.Phys., 31, L1495-L1497 (1992).


Mechanizm of Formation of Two-Dimensional Crystals from Latex Particles on Substrates

N.D. Denkov, O.D. Velev, P.A. Kralchevsky, I.B. Ivanov, H. Yoshimura and K. Nagayama, Langmuir, 8, 3183-3190, (1992).


Two-dimensional crystallization

N.D. Denkov, O.D. Velev, P.A. Kralchevsky, I.B. Ivanov, H. Yoshimura, and K. Nagayama, Nature, 361, 26 (1993).


Nuceation and growth of two-dimensional colloidal crystals

C.D. Dushkin, H. Yoshimura, and K. Nagayama, Chem.Phys.Lett., 204, 455-460 (1993).


Three-dimensional Structure of F1-ATPase of Thermophilic Bacterium PS3 Obtained by Electron Crystallography

N. Ishii, H. Yoshimura, K. Nagayama, Y. Kagawa, and M. Yoshida, J.Biochem., 113, 245-250 (1993).


Obsevation of Latex particles Two-dimensional Crystal Nucleation in Wetting Film on Mercury, Glass, and Mica

A.S. Dimitrov, C.D. Dushkin, H. Yoshimura, and K. Nagayama, Langmuir, 10, 432-440 (1993).


Formation of Two-dimensional Colloid Crystals in Liquid Films under the Action of Capillary Forces

P.A. Kralchevsky, N.D. Denkov, V.N. Paunov, O.D. Velev, I.B. Ivanov, H. Yoshimura, and K. Nagayama  J.Physics: Condensed Matter, 6, A395-A402 (1993).


Two-Dimensional Protein Array Growth in Thin Layers of Protein Solution on Aqueous Subphases

H. Yoshimura, T. Scheybani, W. Baumeister, and K. Nagayama, Langmuir, 10, 3290-3295 (1994).


Color ellipsoscope for real-time imaging of nanometer-scale surface phenomena

E. Adachi, H. Yoshimura, and K.Nagayama , Applied Optics,  34, 729-731 (1995).


Two-dimensional Arrays of Human C-reactive Protein (hCRP) formed on a dense Aqueous subphase underneath a lipid layer

T. Sheybani, H. Yoshimura, K. Nagayama and W. Baumeister, Supramolecular Science, 1, 111-116 (1994).


Artifacts in Atomic Force Microscopic Images of Fine-Particle and Protein Arrays as Evaluated with Scanning Electron Microscopic Imaging and Simulations

T. Miwa, M. Yamaki, H. Yoshimura, S. Ebina, and K. Nagayama, Langmuir , 11, 1711-1714 (1995).


Using Interfacial Tension Measurements to Study the Kinetics of Ferritin and Sugar Adsorption onto Mercury

A. Dimitrov, H. Yoshimura, K. Nagayama  Langmuir, 11, 3937-3942 (1995).


Control of Crystal Forms of Apoferritin by Site-directed Mutagenesis

S. Takeda, H. Yoshimura, S. Endo, T. Takahashi and K. Nagayama, Proteins , 23, 548-556 (1995).


Fabrication and Control of Two-dimensional Crystalline Arrays of Protein Molecules

Kuniaki Nagayama, Shigeki Takeda, Shigeru Endo, and Hideyuki Yoshimura, Jpn. J. Appl. Phys., 34, 3947-3954 (1995).


Lateral Capollary Forces Measured by Torsion Microbalance

Ceco D. Dushkin, Peter A. Kralchevsky, Hideyuki Yoshimura, and Kuniaki Nagayama, Physical Rev. Lett. 75, 3454-3457 (1995).


Stabilization of Fragile Two-Dimensional Protein Crystals at the Water-Air Interface: Lattice of Apoferritin

T. Sheybani, H. Yoshimura, W. Baumeister and K. Nagayama, Langmuir , 12, 431-435 (1996).


Nanoparticle arrays in Freely Suspended Vitrified Films

N. D. Denkov, H. Yoshimura, T. Kouyama, K. Nagayama, Physical Rev. Lett.., 76, 2354-2357 (1996).


Torsion Balance for Measurement of Capillary Immersion Force

Ceco D. Dushkin, Peter A. Kralchevsky, Vesselin N. Paunov, Hideyuki Yoshimura, and Kuniaki Nagayama, Langmuir 12, 641-651 (1996).


Method for Controlled Formation of Vitrified Film for Cryo-Electron Microscopy

N. D. Denkov, H. Yoshimura, K. Nagayama, Ultramicroscopy, 65, 147-158 (1996).


Two-dimensional Crystals of Apoferritin

H. Yoshimura,  Adv. Biophys. 34, 93-107, (1997).


Conditions for Self-Organization of 45_ Vortex and Phase Lag in Electric Polarization

Takahiro Kiriyama, Takeshi Ozawa, Takuo Akimoto, Hideyuki Yoshimura, Toshio Mitsui, Jpn. J. Appl. Phys. 36, 7282-7288, (1997).


Phase Contrast in a Projection X-ray Microscopy and Time Resolved Imaging

H. Yoshimura, S. Kumagai, D. Shoutsu, Y. Sekiya, T. Mitsui, Cell Vision, 4, 210-211 (1997).


Electron Cryomicroscopy of Bacteriorhodopsin Vesicles: Mechanism of Vescle Formation

Nikolai D. Denkov, Hideyuki Yoshimura, Tsutomu Kouyama, Jochen Walz, and Kuniaki Nagayama, Biophysical J., 74, 1409-1420 (1998).


Induced Potential Model for Muscular Contraction Mechanism, Including Two Attached States of Myosin Head

T. Mitsui, S. Kumagai, H. Chiba, H. Yoshimura, and H. Oshima, J. Theor. Biol., 192, 35-41 (1998).


Internal Structures of Small Animals and Tissues

S. Kumagai, T. Horikoshi, H. Chiba, K. Takahashi, D. Shoutsu, H. Yoshimura, T. Mitsui, In X-ray Microscopy and Spectroscopy,  eds. J. Thieme, G. Schahl, D. Rudolph, E. Umbach (eds.) pp II-273-278, Springer (1998).


Mechanical Details of the Induced Potential Model for Muscle Contraction Mechanism

T. Mitsui, S. Kumagai, H. Yoshimura, Memoirs of The Institute of Science and Technology Meiji Univ., 37, 109-146, (1999).


Effect of Growth Conditions on the Structure of Two-Dimensional Latex Crystals: Experiment

C. Dushkin, G. S. Lazarov, S. N. Kotsev, H. Yoshimura, K. Nagayama, Colloid Polymer Science, 277, 914-930 (1999).


Application of SEM-modified X-ray Microscope to Entomology and Histology, and Effects of X-ray Coherence in Imaging

 H. Yoshimura, D. Shoutsu, T. Horikoshi, H. Chiba, S. Kumagai, T. Mitsui, J. Electron.Micros., 49, 621-628, (2000).


Fine Surfaces Structure of Unfixed and Hydrated Marcrophages Observed by Laser-Plasma X-ray Contact Microscopy

Y. Yamamoto, Herman Friedman, H. Yoshimura, T. Tomie, H. Shimizu, T. Majima, In X-ray Microscopy, American Insitute of Physics,174-177, (2000).


Contrast Enhancement and Three-dimensional Computed Tomography in Projection X-ray Microscopy

H. Yoshimura, D. Shoutsu, R. Sano, T. Mitsui, In X-ray Microscopy, American Insitute of Physics, 525-528, (2000).


Development of an X-ray Projection Microscope Using Synchrotron Radiation

K. Shinohara, A. Ito, H. Yoshimura, K. Yada, In X-ray Microscopy, American Insitute of Physics,346-349, (2000).


X-ray Computed Tomography Using Projection X-ray Microscope

H.Yoshimura, C.Miyata, C. Kuzuryu, A.Hori, T.Obi, & Ohyama, N, Proc. SPIE, 4053, 166-171, (2001).


Three-dimensional visualization in projection X-ray Microscopy of Biological Specimens

H.Yoshimura, H.Maeda, A.Hori, T. Horikoshi, H. Takada, K.Igarashi, J. Phys. IV France, 104, 355-358 (2003).


Fabrication of Nickel and Chromium Nanoparticles Using the Protein Cage of Apoferritin

M.Okuda, K.Iwahori, , I.Yamashita, H, Yoshimura, Biotechinology and Bioengineering, 84, 187-194, (2003).


Apprication of the Projection X-ray Microscopy to Biological Specimens

H. Yoshimura, Proc. Arthropod. Embryol. Soc. Jpn. 38, 1-8 (2003).


Crystalline calcium phosphate and magnetic mineral content of Daphinia Resting eggs

T. Kawasaki, H. Yoshimura, T. Shibue, Y. Ikeuchi,M. Sakata, K. Igarashi, H. Takada, K. Hoshino, K. Kohn, H. Namiki, , Zoological Sci. 21, 63-67 (2004).


Effect of nanoparticle density on narrow diameter distribution of carbon nanotubes and particle evolution during chemical vapor deposition growth

G.H. Jeong, S. Suzuki, Y. Kobayashi, A. Yamazaki, H. Yoshimura and Y. Homma, , J. Appl. Phys. 98, 124311-124317 (2005).


Micro-CT of Pseudocneorhinus bifasciatus by projection X-ray microscopy

A. Tanisako, A. Hori, A. Okumura, C. Miyata, C. Kuzuryu, T. Obi, H. Yoshimura, J. Electron Microsc. 54379-383 (2005).


Self-Organized Inorganic Nanoparticle Arrays on Protein Lattices

M. Okuda, Y. Kobayashi, K. Suzuki, K. Sonoda, T. Kondoh, A. Wagawa, A. Kondo, and H. Yoshimura, , Nano Letters, 5, 991-993 (2005). March 23


Cobalt-Filled Apoferritin for Suspended Single-Walled Carbon Nanotube Growth with Narrow Diameter Distribution

G.H. Jeong, A. Yamazaki, S. Suzuki, H. Yoshimura, Y. Kobayashi, and Y. Homma, , J. AM. CHEM. SOC., 127, 8238-8239 (2005).


Protein-assisted Nanoparticle synthesis

Hideyuki Yoshimura, Colloids and Surfaces A, 282-283, 464-470 (2006). 28 Feb.


Magnetic characterization of Daphinia Resting eggs

Masanobu Sakata, Tamaki Kawasaki, Toshimichi Shibue, Atsushi Takada Hideyuki Yoshimura, Hideo Namiki, BBRC, 351, 566-570 (2006).


Size Control of catalytic nanoparticles by thermal treatment and its application to diameter control of single-walled carbon nanotubes

G.H. Jeong, S. Suzuki, Y. Kobayashi, A. Yamazaki, H. Yoshimura, and Y. Homma, Appl. Phys.Lett., 90 (4), 043108 1-3 (2007). 23 Jan.


Production of single-walled carbon nanotubes with narrow diameter distribution using iron nanoparticles derivered from DNA-binding proteins from starved cells

G.H. Jeong, A. Yamazaki, S. Suzuki, H. Yoshimura, Y. Kobayashi, and Y. Homma, Carbon, 45, 978-983 (2007).


Gold-filled apo-ferritin for investigation of single-walled carbon nanotube growth on substrate

Daisuke Takagi, Akira Yamazaki, Yasuyuki Otsuka, Hideyuki Yoshimura, Yoshihiro Kobayashi, Yoshikazu Homma, Chem. Phys. Lett. 445, 213-216 (2007). (Aug.10)


In Vitro synthesis of calcium nanoparticles using the protein cage of apoferritin

Hiroko Fukano, Mamoru Aizawa, Hideyuki Yoshimura, Key Engineer. Mater. 361-363, 183-186 (2008).


Microstructural observation of calcium-deficient single crystal apatite fibers and phase changes during heating

A. Taki, H. Yoshimura and M. Aizawa, Key Engineer. Mater., 361-363, 147-150 (2008).


Phosphate-free synthesis of metal chalcogenide quantum dots by means of in situ-generated hydrogen chalcogenides

Georgei G. Yordanov, Hideyuki Yoshimura, Ceco D. Dushkin, Colloid Polym. Sci., 286, 813-817 (2008)



Fine control of the growth and optical properties of CdSe quantum dots by varying the amount of stearic acid in a liquid paraffin matrix

Georgei G. Yordanov, Hideyuki Yoshimura, Ceco D. Dushkin, Colloid and Surfaces A, 322, 177-182 (2008). 3-May-2008


Synthesis of high-quality core-shell quantum dots of CdSe-CdS by means of gradual heating in liquid paraffin

Georgei G. Yordanov, Hideyuki Yoshimura, Ceco D. Dushkin, Colloid Polym. Sci. 286, 1097-1102 (2008).



Phosphate-free synthesis of metal sulfide quantum dots in sunflower-seed oil

Georgei G. Yordanov, Hideyuki Yoshimura, Ceco D. Dushkin, Nanoscience & Nanotechnology. E. Balabanova, I. Dragieva (eds.), Heron Press, Sofia, 8, 111-114 (2008)


Synthesis of highly dispersive Ca nanoparticles using the protein shell

Hiroko Fukano, Mamoru Aizawa and Hideyuki Yoshimura

Archieves of BioCeramics Research, 8, 72-75, Proceeding of the Asian BioCeramics 2008, Chennai, India , 4 _ 6 Nov. (2008).


Quantum dots tagged poly(alkylcyanoacrylate) nanoparticles intended for bioimaging applications

Georgi Yordanov, Margarita Simeonova, Radostina Alexandrova, Hideyuki Yoshimura, Ceco Dushkin, Colloids and Surfaces A: Physicochem. Eng. Aspects 339, 199_205 (2009) Feb.


Sarcoptes scabiei var. hominis: Three-dimensional structure of a female imago and crusted scabies lesions by X-ray micro-CT

Hideyuki Yoshimura, Takuji Ohigashi, Masayuki Uesugi, Kentaro Uesugi, Toshiaki Higashikawa, Ryuichi Nakamura, Yoshinori Mori, Kunio Shinohara

Experimental Parasitology 122, 268_272 (2009). Apr 29


Fresnel diffraction correction by phase-considered iteration procedure in soft X-ray projection microscopy

Tatsuo Shiina, Tsuyoshi Suzuki, Toshio Honda, Atsushi Ito, Yasuhito Kinjo, Hideyuki Yoshimura, Keiji Yada, Kunio Shinohara, J. Physics: Conference series, 186, 012059 (2009).


Three dimensional structure of apatite scaffolds studied by X-ray micro-CT

Junichi Moria, Mamoru Aizawa, Hideyuki Yoshimura, Bioceramics 22, 225-228 (2009) Oct.


Nanocrystal growth of thioglycolate- coated cadmium telluride dots in aqueous medium

G. Yordanov, I. Trendafilva, H. Fukano, H. Yoshimura, C. Dushkin, Nanoscience & Nanotechnology, 10, 69-72, (2010). Sep.


Characterization of CdTe nanocrystals during their synthesis in liquid paraffin: optical properties and particle growth, Georgi Yordanov, Hideyuki Yoshimura, Ceco Dushkin, J Mater Sci  46, 2338_2344 (2011). Jan.


Synthesis of Uniform and Dispersive Calcium Carbonate Nanoparticles in a Protein Cage through Control of Electrostatic Potential, Hiroko Fukano, Takuya Takahashi, Mamoru Aizawa, and Hideyuki Yoshimura, Inorganic Chemistry 50, 6526-6532 (2011). (June 15)


Micro-CT of Porous Apatite Fiber Scaffolds Studied by Projection X-ray Microscopy, Junichi Moriya, Mamoru Aizawa, Hideyuki Yoshimura, AIP Conference Proceedings, 1365, 407-410 (2011). Sep. 27


Synthesis of ZnO Nanoparticles in the Presence of Different Additives, B. Boche, G. Yordanov, H. Yoshimura, C. Dushkin, Nanoscience & Nanotechnology, 11, 58-61 (2011). (Oct.)


Ultrastructural analysis of hydroxyapatite nanoparticles synthesized under different initial pH conditions using high-resolution transmission electron microscopy, Zhi Zhuang, Toshiisa Konishi, Hideyuki Yoshimura, Mamoru Aizawa, Phosphorus Research Bulletin 26, 081 -086, 2012. Feb.


Development of a,b-plane-oriented hydroxyapatite ceramics as models for living bones and their cell adhesion behavior, Zhi Zhuang, Takahiko J. Fujimi, Mariko Nakamura, Toshiisa Konishi, Hideyuki Yoshimura, Mamoru Aizawa, Acta Biomaterialia 9  6732_6740 (2013). Feb


Ferritin protein encapsulated photoluminescent rare earth nanoparticle, T. Harada, H. Yoshimura, J. Appl. Phys., 114, 044309(1-8) (2013). July


Synthesis of Rare Earth Doped Yttrium-Vanadate nanoparticles Encapsulated with Apoferritin, T. Harada, H. Yoshimura, Phys. Chem. Chem. Phys. 16, 14947--14952 (2014). June


Low temperature studies of the photoluminescence from colloidalCdSe nanocrystals prepared by the hot injection method in liquidparaffin, Evgenia Valcheva, Georgi Yordanov, Hideyuki Yoshimura, Tsvetan Ivanov, Kiril Kirilov, Colloids and Surfaces A: Physicochemical and Engineering Aspects, 461, 158-166 (2014). Aug.


Two-Dimensional Crystallization of P22 Virus-Like Particles, Hideyuki Yoshimura, Ethan Edwards, Masaki Uchida, Kimberly McCoy, Raj Roychoudhury, Benji Schwarz, Dustin Patterson and Trevor Douglas, J. Phys. Chem. B, 120, 5938-5944 (2016) April